|
|
Publications - 2007
Allen, P.B. Nanocrystalline Nanowires: I. Structure Nano
Letters 7(1): 6-10 (2007). BNL-77232-2006-JA.
Allen, P.B. Nanocrystalline Nanowires: II. Photons. Nano
Letters, 7(1): 11-14 (2007). BNL-77233-2006-JA.
Allen, P.B. Nanocrystalline Nanowires: III. Electrons.
Nano Letters 7(5): 1220-1223 (2007). BNL-77234-2006-JA.
Bo, W., Cheng, B., Du, J., Fix, B., George, E., Glimm, J., Grove, J.,
Jia, X., Jin, H., Lee, Y., Li, X., Li, Y., Liu X., Sharp, D.H., Wu, L., and
Yu, Y. Recent progress in the stochastic analysis of turbulent mixing.
Contemporary Mathematics 429: 33-44 (2007). Stony Brook University
Preprint No. SUNYSB-AMS-05-18.
Chen, Y.-R., Zhang, L., and Hybertsen, M.S. Theoretical study of trends in conductance for
molecular junctions formed with armchair carbon nanotube electrodes. Phys. Rev. B
76: 115408 (2007). BNL-77870-2007-JA.
Cheng, Y., Cheng, X., and Deng, Y. Simulating botulinum neurotoxin
with constant pH molecular dynamics in generalized Born implicit solvent.
Computer Physics Communications 177(1-2): 210-213 (2007). BNL-77464-2007-JA.
Fang, B. and Deng, Y. Performance of 3D FFT on 6D QCDOC Torus parallel
supercomputer. Computer Physics Communications 176: 531-538, 2007.
BNL-77465-2007-JA.
Fernando, G.W., Kocharian, A.N., Palandage, P., Wang, T., and Davenport, J.W.
Phase separation and electron pairing in repulsive Hubbard clusters.
Phys. Rev. B 75: 085109-1 - 085109-5, 2007. BNL-77703-2007-JA.
Glimm, J., Fix, B., Li, X., Liu, J., Liu, X., Lu, T., Samulyak, R., and Xu,
Z. Front tracking under TSTT. Astronomical Society of the
Pacific 359: 15 (2007).
Han, G., Deng, Y., Glimm, J., and Martyna, G. Error and timing
analysis of multiple time-step integration methods for molecular dynamics.
Computer Physics Communications 176: 271-291, 2007. BNL-77462-2007-JA.
Kim, J., Zhu, W., Chang, L., Benter, P., and Ernst, T. Unified structural
equation modeling approach for the analysis of multisubject, multivariate
functional MRI data. Human Brain Mapping 28: 85-93 (2007).
Kocharian, A.N., Fernando, G.W., Wang, A.T., Palandage, K., and Davenport,
J.W. Exact thermodynamics of pairing and charge-spin separation
crossovers in small Hubbard nanoclusters. Phys. Lett. A. 364: 57-65
(2007) BNL-77675-2007-JA.
Liu, J., Lim, H.-K., Glimm, J., and Li, X. A conservative front
tracking method in N-dimensions. J. Sci. Comp. 31(1/2): 213-236 (2007).
BNL-79187-2007-JA. Stony Brook
University Preprint No. SUNYSB-AMS-06-04.
Liu, X., Li, Y., Glimm, J., and Li, X.L. A front tracking algorithm
for limited mass diffusion. J. Computational Physics 222: 644-653
(2007). BNL-78119-2007-JA. Stony Brook University Preprint No.
SUNYSB-AMS-06-01.
Lu, T., Miao, X., and Metcalf, H. Nonadiabatic transitions in
finite-time adiabatic rapid passage. Phys. Rev. A 75: 063422-1 -
063422-5 (2007).
Lu, T., Samulyak, R., and Glimm, J. Direct numerical simulation of bubbly
flows and application to cavitation mitigation. J. Fluids Eng. 129(5):
595-604 (2007). BNL-73502-2007-JA-R1.
Okur, A., Roe, D., Cui, G., Hornak, V., and Simmerling, C. Improving
convergence of replica exchange simulations through coupling to a high
temperature structure reservoir. J. Chem. Theory and Computation
3(2): 557-568 (2007). BNL-76951-2006-JA.
Palandage, K., Fernando, G., Kocharian, A., and Davenport, J. An exact
study of pairing fluctuations and phase diagrams in four-site Hubbard
nanoclusters. J. Computer-Aided Mater. Des. 14: 103-108-2007.
BNL-78005-2007-JA.
Quek, S.Y., Venkataraman, L., Choi, H.J., Louie, S.G., Hybertsen, M.S., and
Neaton, J.B. Amine-gold linked single-molecule circuits: Experiment and
theory. Nano Letters 7(11): 3477-3482 (2007). BNL-78033-2007-JA.
Quinn, J.R., Foss, Jr., F.W., Venkataraman, L., Hybertsen, M.S., and Breslow,
R. Single-molecule junction conductance through diaminoacenes.
J. Am. Chem. Soc. 129(21): 6714 (2007). BNL-77704-2007-JA.
Rissland, P. and Deng, Y. Electrostatic force computation for biomolecules
on supercomputers with torus networks. Parallel Computing 33(2): 116-123
(2007).
Roe, D.R., Okur, A., Wickstrom, L., Hornak, V., and Simmerling, C.
Secondary structure bias in generalized Born solvent models:
Comparison of conformational ensembles and free energy of solvent
polarization from explicit and implicit solvation. J. Chem. Phys. B
111: 1846-1857 (2007). BNL-77921-2007-JA.
Samulyak, R., Lu, T., and Parks, P. A magnetohydrodynamic simulation of
pellet ablation in the electrostatic approximation. Nuclear Fusion 47:
103-118 (2007). BNL-75843-2006-JA.
Samulyak, R., Du, J., Glimm, J., and Xu, Z. A numerical algorithm for
MHD of free surface flows at low magnetic Reynolds numbers. J. Computational
Phys. 226(2): 1532-1549 (2007).
Shen, X., Allen, P.B., Muckerman, J.T., Davenport, J.W., and Zheng, J.-C.
Wire versus tube: Stability of small one-dimensional ZnO
nanostructures. Nano Letters 7: 2267 (2007). BNL-78124-2007-JA.
Stolyarova (Polyakova), E., Rim, K.T., Ryu, S., Maultzsch, J., Kim, P., Brus,
L.E., Heinz, T.F., Hybertsen, M.S., and Flynn, G.W. High-resolution
scanning tunneling microscopy imaging of mesoscopic graphene sheets on an
insulating surface. Proc. Nat. Acad. Sci. 104(22): 9209-9212.
BNL-77779-2007-JA.
Strockbine, B. and Rizzo, R.C. Binding of anti-fusion peptides with HIVgp41
from molecular dynamics simulations: Quantitative correlation with
experiment. Proteins: Struct., Funct., Bioinf. 67(3): 630-642 (2007).
Xu, Z., Kim, M., Lu, T., Oh, W., Glimm, J., Samulyak, R., Li, X., and Tzanos,
C. Discrete bubble modeling of unsteady cavitating flow. Int. J.
for Multiscale Computational Engrg. 4(5/6): 601-616 (2007).
BNL-78120-2007-JA.
Xu, Z., Glimm, J., Zhang, Y., and Liu, X. A multiscale front tracking
method for compressible free surface flows. Chem. Engineering Science
62(13): 3538-3548 (2007). BNL-79256-2007-JA.
Zhang, Y., Drake, R.P., and Glimm, J. Numerical evaluation of the
impact of laser preheat on interface structure and instability.
Physics of Plasmas 14: 1-10 (2007).
Back to Publications
Last Modified: May 2, 2008
Please forward all questions about this site to:
Claire Lamberti
|
