Publications - 2008

Allen, P.B., Davenport, J.W., Liu, P., McGuigan, M., Muckerman, J., Hybertsen, M., Karim, A., Shen, X., and Small, Y.  Computational energy research at the CFN.  SciDAC Review, Winter 2008, 38-47.  BNL-81516-2008-JA.

Bo, W., Jin, H., Kim, D., Liu, X., Lee, H., Pestieau, N., Yu, Y., Glimm, J., and Grove, J.  Comparison and validation of multi phase closure models.  Computers and Mathematics with Applications 56(5): 1291-1302 (2008).  Stony Brook University Preprint No. SUNYSB-AMS-07-02.  BNL-81515-2008-JA.

Bo, W., Fix, B., Glimm, J., Li, X., Liu, T., Samulyak, R., and Wu, L.  FronTier and applications to scientific and engineering problems.  Proceedings of International Congress of Industrial and Applied Mathematics, accepted for publication.

Cheng, B.L., Glimm, J., Sharp, D.H., and Yu, Y.  A multifluid mix model for the layered incompressible materials.  Physica Scripta T132: 014016 (2008).  Proceedings of World Conference on Turbulence Mixing and Beyond, accepted for publication.

Ding, F., Layten, M., and Simmerling, C.  Solution structure of HIV-1 protease flaps probed by comparison of molecular dynamics simulation ensembles and EPR experiments.  J. Am. Chem. Soc. 130(23): 7184-7185 (2008).

Fix, B., Glimm, J., Kaufman, R., Li, X., and Wu, L.  Verification and validation of FronTier code and application to fluid interfacial instabilities.  Physica Scripta T132: 014049 (2008).  Proceedings of World Conference on Turbulence Mixing and Beyond, accepted for publication.

Gilman, Y., Allen, P.B., and Hybertsen, M.S.  Density functional study of adsorption of isocyanides on the gold (111) surface.  J. Phys. Chem. C 112(9): 3314-3320 (2008).  BNL-77235-2006-JA.

Glimm, J., Ji, X., Li, J., Li, X., Zhang, P., Zhang, T., and Zheng, Y.  Transonic shock formation in a rarefaction Riemann problem for the 2-D compressible Euler equations.  SIAM J. Appl. Math. 69: 720-742 (2008).  BNL-80158-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-08.

Jin, H. and Glimm, J.  Verification and validation for turbulent mixing.  Nonlinear Analysis 69(3): 874-879 (2008).  BNL-78142-2007-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-04.

Kocharian, A.N., Fernando, G.W., Palandage, K., and Davenport, J.W.  Coherent and incoherent pairing instabilities and spin-charge separation in bipartite and nonbipartite nanoclusters:  Exact results.  Phys. Rev. B 78: 075431 (2008).  BNL-81427-2008-JA.

Lee, H., Jin, H., Yu, Y., and Glimm, J.  On validation of turbulent mixing simulations of Rayleigh-Taylor instability.  Phys. Fluids 20(1): 012102 (2008).  BNL-78141-2007-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-03.

Lim, H., Yu, Y., Glimm, J., Li, X., and Sharp, D.H.  Chaos, transport, and mesh convergence for fluid mixing.  Acta Mathematicae Applicatae Sinica 24(3): 355-368 (2008).    BNL-80124-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-09.  Los Alamos National Laboratory Preprint No. LA-UR-08-0068.

Lim, H., Yu, Y., Jin, J., Kim, D., Lee, H., Glimm, J., Li, X., and Sharp, D.H.  Multi scale models for fluid mixing.  Special Issue Computer Methods in Applied Mechanics and Engineering 197(43-44): 3435-3444 (2008).  BNL-80125-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-07-05.

Lu, T., Xu, Z., Samulyak, R., Glimm, J., and Ji, X.M.  Dynamic phase boundaries for compressible fluids.  SIAM J. on Scientific Computing 30(2): 895-915 (2008).  BNL-80255-2008-JA.  Stony Brook University Preprint No. SUNYSB-AMS-06-07.

Lu, T., Du, J., and Samulyak, R.  A Numerical Algorithm for Magnetohydrodynamics of Ablated Materials.  J. Nanoscience and Nanotechnology 8(7): 3674-3685 (2008).  BNL-81897-2008-JA.

McGuigan, M.  Toward the graphics Turing scale on a Blue Gene supercomputer.  Presented at SC08, November 15-21, 2008, Austin, TX.  BNL-80138-2008-CP.

McGuigan, M., Davenport, J., and Glimm, J. Computational approach to finite size and shape effects in iron nanomagnets. J. Magnetism and Magnetic Materials 320 (3-4): 190-196 (2008).  BNL-77485-2007-JA.

Samulyak, R., Lu, T., Parks, P., Glimm, J., and Li, X.  Simulation of pellet ablation for Tokamak fueling with ITAPS front tracking.  J. Physics: Conference Series 25: 012081 (2008).  BNL-81285-2008-JA.

Song, K., Hornak, V., de los Santos, C., Grollman, A., and Simmerling, C.  Molecular mechanics parameters for the FapydG DNA lesion.  J. Computational Chemistry 29(1): 17-23 (2008).  BNL-76949-2006-JA.


 

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Last Modified: November 6, 2009
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One of ten national laboratories overseen and primarily funded by the Office of Science of the U.S. Department of Energy (DOE), Brookhaven National Laboratory conducts research in the physical, biomedical, and environmental sciences, as well as in energy technologies and national security. Brookhaven Lab also builds and operates major scientific facilities available to university, industry and government researchers. Brookhaven is operated and managed for DOE's Office of Science by Brookhaven Science Associates, a limited-liability company founded by Stony Brook University, the largest academic user of Laboratory facilities, and Battelle, a nonprofit, applied science and technology organization.

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