Carbon Cycle Science & Technology Group

Recent Publications

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2011

Best M, Koenig K, McDonald K, Schueller M, Rogers A, Ferrieri R (2011) Inhibition of trehalose breakdown increases new carbon partitioning into cellulosic biomass in Nicotiana tabacum. Carbohydrate Research 346, 595-601.

Darbah J.N.T., Jones W.S., Burton A.J., Nagy J. & Kubiske M.E. (2011) Acute O(3) damage on first year coppice sprouts of aspen and maple sprouts in an open-air experiment. Journal of Environmental Monitoring, 13, 2436-2442.

De Corte S., Hennebel T., Fitts J.P.et al. (2011) Biosupported Bimetallic Pd-Au Nanocatalysts for Dechlorination of Environmental Contaminants. Environmental Science & Technology, 45, 8506-8513.

De Gusseme B., Hennebel T., Christiaens E.et al. (2011) Virus disinfection in water by biogenic silver immobilized in polyvinylidene fluoride membranes. Water Research, 45, 1856-1864.

Elzinga E.J., Gao Y., Fitts J.P. & Tappero R. (2011) Iron speciation in urban dust. Atmospheric Environment, 45, 4528-4532.

Gillespie K.M., Rogers A. & Ainsworth E.A. (2011) Growth at elevated ozone or elevated carbon dioxide concentration alters antioxidant capacity and response to acute oxidative stress in soybean (Glycine max). Journal of Experimental Botany, 62, 2667-2678.

Hennebel T., Van Nevel S., Verschuere S.et al. (2011) Palladium nanoparticles produced by fermentatively cultivated bacteria as catalyst for diatrizoate removal with biogenic hydrogen. Applied Microbiology and Biotechnology, 91, 1435-1445.

Kumpiene J., Mench M., Bes C.M. & Fitts J.P. (2011) Assessment of aided phytostabilization of copper-contaminated soil by X-ray absorption spectroscopy and chemical extractions. Environmental Pollution, 159, 1536-1542.

Wielopolski (2011) Geological Carbon Seequestration: A New Approach for Near-Surface Assurance Monitoring. International JOurnal of Environmental Research. Public Health. 8, 818-829.

Wielopolski L, Chatterjee A, Mitra S, Lal R (2011) In situ determination of soil carbon pool by inelastic neutron scattering: comparison with dry combustion. Geoderma 160, 394-399.

2010

Calfapietra C, Ainsworth EA, Beier C, De Angelis P, Ellsworth DS, Godbold DL, Hendrey GR, Hickler T, Hoosbeek MR, Karnosky DF, King J, Körner C, Leakey ADB, Lewin KF, Liberloo M, Long SP, Lukac M, Matyssek R, Miglietta F, Nagy J, Norby RJ, Oren R, Percy KE, Rogers A, Scarascia-Mugnozza G, Stitt M, Taylor G, Ceulemans R (2010) Challenges in elevated CO2 experiments on forests. Trends in Plant Science 15, 5-10.

Chidambaram D., Hennebel T., Taghavi S.et al. (2010) Concomitant Microbial Generation of Palladium Nanoparticles and Hydrogen To Immobilize Chromate. Environmental Science & Technology, 44, 7635-7640.

De Gusseme B., Du Laing G., Hennebel T.et al. (2010) Virus Removal by Biogenic Cerium. Environmental Science & Technology, 44, 6350-6356.

Fitts J.P., Chidambaram D., Hennebel T., Taghavi S., Boon N., Verstraete W. & van der Lelie D. (2010) Structure-catalytic activity relationship of biogenic Pd nanoparticles. Geochimica Et Cosmochimica Acta, 74, A296-A296.

Spangler LH, Dobeck LM, Repasky KS (2010) A shallow subsurface controlled release facility in Bozeman, Montana, USA, for testing near surface CO2 detection techniques and transport models. Environmental Earth Sciences, 60, 227-239.

Tallis MJ, Lin Y, Rogers A, Zhang J, Street NR, Miglietta F, Karnosky DF, De Angelis P, Taylor G (2010) The transcriptome of Populus in elevated CO2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence. New Phytologist 186, 415-428.

Wielopolski L., Johnsen K. & Zhang Y. (2010) Soil Analysis Based on Samples Withdrawn from Different Volumes: Correlation versus Calibration. Soil Science Society of America Journal, 74, 812-819.

Wielopolski L. & Mitra S. (2010) Near-surface soil carbon detection for monitoring CO2 seepage from a geological reservoir. Environmental Earth Sciences, 60, 307-312.

Wielopolski L, Yanai RD, Levine CR, Mitra S, Vadeboncoeur MA (2010) Rapid, non-destructive carbon analysis of forest soils using neutron-induced gamma-ray spectroscopy. Forest Ecology and Management, 260, 1132-1137.

2009

Chappaz A., Lyons T.W., Fitts J.P. & Myneni S.C.B. (2009) Exploring the relationship between molybdenum and organic matter through experimental approaches and XAS and NMR characterization. Geochimica Et Cosmochimica Acta, 73, A209-A209.

Chidambaram D., Fitts J.P., Hennebel T., Boon N., Verstraete W. & Van der Lelie D. (2009) ENVR 61-In situ formation of nanoparticles as an effective biocatalyst for environmental remediation. Abstracts of Papers of the American Chemical Society, 238.

Chatterjee A., Lal R., Wielopolski L., Martin M.Z. & Ebinger M.H. (2009) Evaluation of Different Soil Carbon Determination Methods. Critical Reviews in Plant Sciences, 28, 164-178.

Cseke LJ, Tsai C-J, Rogers A, Nelson MP, White HL, Karnosky DF, Podila GK (2009) Transcriptomic comparison in the leaves of two aspen genotypes having similar carbon assimilation rates but different allocation patterns under elevated CO2. New Phytologist. 182, 891-911.

Leakey ADB, Ainsworth EA, Bernacchi CJ, Rogers A, Long SP, Ort DR (2009) Elevated CO2 effects on plant carbon, nitrogen and water relations: six important lessons from FACE. Journal of Experimental Botany. 60, 2859-2876.

Leakey ADB, Ainsworth EA, Bernard SM, Markelz RJC, Ort DR, Placella SA, Rogers A, Smith MD, Sudderth EA, Weston DJ, Wullschleger SD, Yuan S (2009) Gene expression profiling - opening the black box of plant ecosystem responses to global change. Global Change Biology. 15, 1201-1213.

Lewin KF, Nagy J, Nettles WR, Cooley DM, Rogers A (2009) Comparison of gas use efficiency and treatment uniformity in a forest ecosystem exposed to elevated [CO2] using pure and pre-diluted Free Air CO2 Enrichment technology. Global Change Biology. 15, 388-395.

Mitra S (2009) Time-Sequenced Prompt-Gamma Neutron Activation Analysis In: Encyclopedia of Analytical Chemistry (RA Meyers Ed.) pp 1-16. ISBN 978-0-471-97670-7. John Wiley & Sons Ltd, Chichester, UK

Rogers A, Ainsworth EA, Leakey ADB (2009)  Will elevated carbon dioxide concentration amplify the benefits of nitrogen fixation in legumes? Plant Physiology 151, 1009-1016.

Rogers A, Gibon Y (2009) Enzyme kinetics: theory & practice. In: Plant Metabolic Networks (J Schwender Ed.)  pp 71-103. ISBN 978-0-38-778744-2. Springer, Berlin Heidelberg New York.

van der Lelie D, Taghavi S, Monchy S, Schwender J, Miller L, Ferrieri R, Rogers A, Zhu W, Weyens N, Vangronsveld J, Newman L (2009) Poplar and its bacterial endophytes: coexistence and harmony.  Critical Reviews in Plant Sciences 28, 346-358.

Wielopolski L., Ramirez L.M., Spungen A.M., Swaby S., Asselin P. & Bauman W.A. (2009) Measuring partial body potassium in the legs of patients with spinal cord injury: a new approach. Journal of Applied Physiology, 106, 268-273.

2008

Ainsworth EA, Beier C, Calfapietra C, Cuelemans R, Durand-Tarfid M, Godbold DL, Hendrey GR, Hickler T, Kaduk J, Karnosky DF, Kimball BA, Körner C, Koorneef M, LaFarge T, Leakey ADB, Lewin KF, Long SP, Manderscheid R, McNeil DL, Mies TA, Miglietta F, Morgan JA, Nagy J, Norby RJ, Norton RM, Percy KE, Rogers A, Soussana J-F, Stitt M, Weigel H-J, White JW (2008) Next generation of elevated [CO2] experiments with crops: A critical investment for feeding the future world. Plant, Cell & Environment. 31, 1317-1324.

Ainsworth EA, Rogers A, Leakey ADB (2008) Targets for crop biotechnology in a future high-CO2 and high O3 world. Plant Physiology. 147, 13-19.

Biegalski S., Doron O. & Wielopolski L. (2008) Time and depth dependent fluxes due to 14 MeV neutrons impinging soil. Journal of Radioanalytical and Nuclear Chemistry, 277, 193-198.

Doron O., Wielopolski L. & Biegalski S. (2008) Advantages of mesh tallying in MCNP5 for soil analysis calculations. Journal of Radioanalytical and Nuclear Chemistry, 276, 183-186.

Karipot A., Leclerc M.Y., Zhang G.S., Lewin K.F., Nagy J., Hendrey G.R. & Starr G. (2008) Influence of nocturnal low-level jet on turbulence structure and CO2 flux measurements over a forest canopy. Journal of Geophysical Research-Atmospheres, 113.

Moreels D., Crosson G., Garafola C., Monteleone D., Taghavi S., Fitts J.P. & van der Lelie D. (2008) Microbial community dynamics in uranium contaminated subsurface sediments under biostimulated conditions with high nitrate and nickel pressure. Environmental Science and Pollution Research, 15, 481-491.

Tan H., Mitra S., Wielopolski L., Fallu-Labruyere A., Hennig W., Chu Y.X. & Warburton W.K. (2008) A multiple time-gated system for pulsed digital gamma-ray spectroscopy. Journal of Radioanalytical and Nuclear Chemistry, 276, 639-643.

Weston DJ, Gunter LE, Rogers A, Wullschleger SD (2008) Connecting genes, signaling networks and molecular signatures to environmental stress phenotypes in plants. BMC Systems Biology. 2, 16.

Wielopolski L., Hendrey G., Johnsen K.H., Mitra S., Prior S.A., Rogers H.H. & Torbert H.A. (2008) Nondestructive system for analyzing carbon in the soil. Soil Science Society of America Journal, 72, 1269-1277.

Wielopolski L., Mitra S. & Doron O. (2008) Non-carbon-based compact shadow shielding for 14 MeV neutrons. Journal of Radioanalytical and Nuclear Chemistry, 276, 179-182.

2007

Ainsworth EA, Rogers A (2007) The response of photosynthesis and stomatal conductance to rising [CO2]: mechanisms and environmental interactions. Plant, Cell & Environment 30, 258-270.

Ainsworth EA, Rogers A, Leakey ADB, Heady LE, Gibon Y, Stitt M, Schurr U (2007) Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? Journal of Experimental Botany 58, 579-591.

Junker BH, Lonien J, Heady EH, Rogers A, Schwender J (2007) Parallel determination of enzyme activities and in vivo fluxes in Brassica napus embryos grown on organic or inorganic nitrogen source.  Phytochemistry. 68, 2232-2242.

Karnosky DF, Werner H, Holopainen T et al. (2007) Free-air exposure systems to scale up ozone research to mature trees. Plant Biology, 9, 181-190.

Kgope B.S., Midgley G.F., Bond W.J., Nagy J. & Cramer M.D. (2007) How is carbon allocation of African Savanna trees affected by atmospheric CO2 change? South African Journal of Botany, 73, 294-294.

Mitra S., Wielopolski L., Tan H., Fallu-Labruyere A., Hennig W. & Warburton W.K. (2007) Concurrent measurement of individual gamma-ray spectra during and between fast neutron pulses. IEEE Transactions on Nuclear Science, 54, 192-196.

Tan H., Mitra S., Fallu-Labruyere A., Hennig W., Chu Y.X., Wielopolski L. & Warburton W.K. (2007) A digital spectrometer approach to obtaining multiple time-resolved gamma-ray spectra for pulsed spectroscopy. Nuclear Instruments & Methods in Physics Research Section B-Beam Interactions with Materials and Atoms, 263, 63-66.

Wielopolski L., Ramirez L.M., Gallagher D.et al. (2007) Measuring partial body potassium in the arm versus total body potassium. Journal of Applied Physiology, 102, 2084-2084.

2006

Ainsworth EA, Rogers A, Vodkin LO, Walter A, Schurr U (2006) The effects of elevated [CO2] on soybean gene expression: An analysis of growing and mature leaves. Plant Physiology 142, 135-147.

Bernacchi CJ, Leakey ADB, Heady LE, Morgan PB, Rogers A, Long SP, Ort DR (2006) Hourly and Seasonal variation in photosynthesis and stomatal conductance of soybean grown at future CO2 and ozone concentrations for three years under fully open air field conditions. Plant, Cell & Environment 29, 2077-2090.

Karipot A, Leclerc MY, Zhang G, Martin T, Starr G, Hollinger D, McCaughey JH, Hendrey GR (2006) Nocturnal CO2 exchange over a tall forest canopy associated with intermittent low-level jet activity. Journal of Theoretical Applied Climate 85, 243-248

Leakey ADB, Uribelarrea M, Ainsworth EA, Naidu SL, Rogers A, Ort DR, Long SP (2006)  Photosynthesis, productivity and yield of maize are not affected by open-air elevation of CO2 concentration in the absence of drought. Plant Physiology. 140, 779-790.

Ort DR, Ainsworth EA, Aldea M, Allen  DJ, Bernacchi CJ, Berenbaum MR, Bollero GA, Cornic G, Davey PA, Dermody O, Dohleman FG, Hamilton JG, Heaton EA, Leakey ADB, Mahoney J, Mies TA , Morgan PB, Nelson RL, Rogers A, Zangerl AR, Zhu X-G, DeLucia EH, Long SP (2006) SoyFACE: The effects and interactions of elevated [CO2] and [O3] on soybean.  In: Managed Ecosystems and CO2 (J. Nösberger, S.P. Long, R.J. Norby, M. Stitt, G.R. Hendrey, H. Blum Eds), pp.71-86. ISBN-10 3-540-31236-6. Springer, Berlin Heidelberg New York.

Ramirez L.M., Wielopolski L., Gallagher D., Heymsfield S.B. & Wang J. (2006) Novel approach: Measurement of partial blody potassium in the arm in children. Faseb Journal, 20, A588-A589.

Rogers A, Ainsworth EA (2006) The response of foliar carbohydrates to elevated [CO2]. In: Managed Ecosystems and CO2 (J. Nösberger, S.P. Long, R.J. Norby, M. Stitt, G.R. Hendrey, H. Blum Eds), pp.293-308. ISBN-10 3-540-31236-6. Springer, Berlin Heidelberg New York.

Rogers A, Ainsworth EA, Kammann C (2006) FACE value, perspectives on the future of Free Air CO2 Enrichment Studies. In: Managed Ecosystems and CO2 (J. Nösberger, S.P. Long, R.J. Norby, M. Stitt, G.R. Hendrey, H. Blum Eds), pp.431-449. ISBN-10 3-540-31236-6. Springer, Berlin Heidelberg New York.

Rogers A, Gibon Y, Stitt M, Morgan PB, Bernacchi CJ, Ort DR, Long SP (2006) Increased carbon availability at elevated carbon dioxide concentration improves nitrogen assimilation in a legume. Plant, Cell & Environment. 29, 1651-1658.

Wielopolski L (2006) Inelastic neutron scattering for assessing soil carbon. In: Encyclopedia of Soil Science,Vol 1,Second Edition (R.Lal, Ed) pp. 863-866. Taylor and Francis, New York.

Wielopolski L (2006), In Situ Non-invasive Soil Carbon Analysis: Sample Size and Geostatistical Considerations. In: Carbon Sequestration in Soils of Latin America (R. Lal, C. Cerri, M. Bernoux, J. Etchevers, and E. Cerri, Eds)pp 443-455. The Haworth Press, Inc. Philadelphia.

Wielopolski L., Ramirez L.M., Gallagher D., Heymsfield S.B. & Wang Z.M. (2006) Measuring partial body potassium in the arm versus total body potassium. Journal of Applied Physiology, 101, 945-949.

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Last Modified: November 18, 2011
Please forward all questions about this site to: Alistair Rogers


DOE, Office of Science One of ten national laboratories overseen and primarily funded by the Office of Science of the U.S. Department of Energy (DOE), Brookhaven National Laboratory conducts research in the physical, biomedical, and environmental sciences, as well as in energy technologies and national security. Brookhaven Lab also builds and operates major scientific facilities available to university, industry and government researchers. Brookhaven is operated and managed for DOE's Office of Science by Brookhaven Science Associates, a limited-liability company founded by the Research Foundation for the State University of New York on behalf of Stony Brook University, the largest academic user of Laboratory facilities, and Battelle, a nonprofit, applied science and technology organization.

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