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2016 Environmental & Climate Sciences Dept Publications


Ali, A. A., Xu, C., Rogers, A., Fisher, R. A., Wullschleger, S. D., Massoud, E. C., Vrugt, J. A., Muss, J. D., McDowell, N. G., Fisher, J. B., Reich, P. B., and Wilson, C. J. A global scale mechanistic model of photosynthetic capacity (LUNA V1.0). Geosci. Model Dev. 9, 587-606, doi:10.5194/gmd-9-587-2016 (2016). [BNL-112436-2016-JA]

Bateman, A. P., Gong, Z., Harder, T. H., de Sá, S. S., Wang, B., Castillo, P., China, S., Liu, Y., O'Brien, R. E., Palm, B., Shiu, H. W., da Silva, G., Thalman, R., Adachi, K., Alexander, M. L., Artaxo, P., Bertram, A. K., Buseck, P. R., Gilles, M. K., Jimenez, J. L., Laskin, A., Manzi, A. O., Sedlacek, A., Souza, R. A. F., Wang, J., Zaveri, R., and Martin, S. T. Anthropogenic influences on the physical state of submicron particulate matter over a tropical forest. Atmos. Chem. Phys., accepted, doi:10.5194/acp-2016-639 (2016). [BNL-112747-2016-JA]

Berg, L. K., Fast, J. D., Barnard, J. C., Burton, S. P., Cairns, B., Chand, D., Comstock, J. M., Dunagan, S., Ferrare, R. A., Flynn, C. J., Hair, J. W., Hostetler, C. A., Hubbe, J., Jefferson, A., Johnson, R., Kassianov, E. I., Kluzek, C. D., Kollias, P., Lamer, K., Lantz, K., Mei, F., Miller, M. A., Michalsky, J., Ortega, I., Pekour, M., Rogers, R. R., Russell, P. B., Redemann, J., Sedlacek, A. J., Segal-Rosenheimer, M., Schmid, B., Shilling, J. E., Shinozuka, Y., Springston, S. R., Tomlinson, J. M., Tyrrell, M., Wilson, J. M., Volkamer, R., Zelenyuk, A., and Berkowitz, C. M. The Two-Column Aerosol Project: Phase I Overview and impact of elevated aerosol layers on aerosol optical depth. J. Geophys. Res. Atmos. 121, 336-361, doi:10.1002/2015JD023848 (2016). [BNL-112440-2016-JA]

Borque, P., Luke, E., and Kollias, P. On the unified estimation of turbulence eddy dissipation rate using Doppler cloud radars and lidars. J. Geophys. Res. Atmos. 121, 5972-5989, doi:10.1002/2015JD024543 (2016). [BNL-112561-2016-JA]

Burnett, A., Rogers, A., Rees, M., and Osborne, C. P. Carbon source-sink limitations differ between two species with contrasting growth strategie. Plant Cell Environ., accepted (2016). [BNL-112493-2016-JA]

Cavender-Bares, J., Meireles, J., Couture, J., Kaproth, M., Kingdon, C., Singh, A., Serbin, S., Center, A., Zuniga, E., Pilz, G., and Townsend, P. Associations of Leaf Spectra with Genetic and Phylogenetic Variation in Oaks: Prospects for Remote Detection of Biodiversity. Remote Sensing 8, 221, doi:10.3390/rs8030221 (2016). [BNL-112303-2016-JA]

Cecchini, M. A., Machado, L. A. T., Comstock, J. M., Mei, F., Wang, J., Fan, J., Tomlinson, J. M., Schmid, B., Albrecht, R., Martin, S. T., and Artaxo, P. Impacts of the Manaus pollution plume on the microphysical properties of Amazonian warm-phase clouds in the wet season. Atmos. Chem. Phys. 16, 7029-7041, doi:10.5194/acp-16-7029-2016 (2016). [BNL-112537-2016-JA]

Chen, J., Liu, Y., Zhang, M., and Peng, Y. New understanding and quantification of the regime dependence of aerosol-cloud interaction for studying aerosol indirect effects. Geophys. Res. Lettrs 43, 1780-1787, doi:10.1002/2016GL067683 (2016). [BNL-111944-2016-JA]

Collier, S., Zhou, S., Onasch, T. B., Jaffe, D. A., Kleinman, L., Sedlacek III, A. J., Briggs, N., Hee, J., Fortner, E., Shilling, J. E., Worsnop, D., Yokelson, R. J., Parworth, C., Ge, X., Xu, J., Butterfield, Z., Chand, D., Dubey, M. K., Pekour, M., Springston, S., and Zhang, Q. Regional Influence of Aerosol Emissions from Wildfires Driven by Combustion Efficiency: Insights from the BBOP Campaign. Environ. Sci. Technol. 50, 8613-8622, doi:10.1021/acs.est.6b01617 (2016). [BNL-112467-2016-JA]

Couture, J. J., Singh, A., Rubert-Nason, K. F., Serbin, S. P., Lindroth, R. L., and Townsend, P. A. Spectroscopic determination of ecologically relevant plant secondary metabolites. Methods in Ecology and Evolution, 1-11, doi:10.1111/2041-210X.12596 (2016). [BNL-112412-2016-JA]

De Kauwe, M. G., Lin, Y.-S., Wright, I. J., Medlyn, B. E., Crous, K. Y., Ellsworth, D. S., Maire, V., Prentice, I. C., Atkin, O. K., Rogers, A., Niinemets, Ü., Serbin, S. P., Meir, P., Uddling, J., Togashi, H. F., Tarvainen, L., Weerasinghe, L. K., Evans, B. J., Ishida, F. Y., and Domingues, T. F. A test of the 'one-point method' for estimating maximum carboxylation capacity from field-measured, light-saturated photosynthesis. New Phytologist 210, 1130-1144, doi:10.1111/nph.13815 (2016). [BNL-112006-2016-JA]

DeMott, P. J., Hill, T. C. J., McCluskey, C. S., Prather, K. A., Collins, D. B., Sullivan, R. C., Ruppel, M. J., Mason, R. H., Irish, V. E., Lee, T., Hwang, C. Y., Rhee, T. S., Snider, J. R., McMeeking, G. R., Dhaniyala, S., Lewis, E. R., Wentzell, J. J. B., Abbatt, J., Lee, C., Sultana, C. M., Ault, A. P., Axson, J. L., Diaz Martinez, M., Venero, I., Santos-Figueroa, G., Stokes, M. D., Deane, G. B., Mayol-Bracero, O. L., Grassian, V. H., Bertram, T. H., Bertram, A. K., Moffett, B. F., and Franc, G. D. Sea spray aerosol as a unique source of ice nucleating particles. Proceed. Natl. Acad. Sci. 113, 5797-5803, doi:10.1073/pnas.1514034112 (2016). [BNL-112477-2016-JA]

Fast, J. D., Berg, L. K., Zhang, K., Easter, R. C., Ferrare, R. A., Hair, J. W., Hostetler, C. A., Liu, Y., Ortega, I., Sedlacek, A., Shilling, J. E., Shrivastava, M., Springston, S. R., Tomlinson, J. M., Volkamer, R., Wilson, J., Zaveri, R. A., and Zelenyuk, A. Model representations of aerosol layers transported from North America over the Atlantic Ocean during the Two-Column Aerosol Project. J. Geophys. Res. Atmos. 121, 9814-9848, doi:10.1002/2016JD025248 (2016). [BNL-113178-2016-JA]

Feldberg, S. W. and Lewis, E. R. Concentration and Density Changes at an Electrode Surface and the Principle of Unchanging Total Concentration. J. Electrochemical Soc. 163, H3167-H3172, doi:10.1149/2.0231604jes (2016). [BNL-111892-2016-JA]

Feng, H., Qian, Y., Gallagher, F. J., Zhang, W., Yu, L., Liu, C., Jones, K. W., and Tappero, R. Synchrotron micro-scale measurement of metal distributions in Phragmites australis and Typha latifolia root tissue from an urban brownfield site. J. Environ. Sci. 41, 172-182, doi:10.1016/j.jes.2015.07.015 (2016). [BNL-112048-2016-JA]

Giangrande, S. E., Toto, T., Bansemer, A., Kumjian, M. R., Mishra, S., and Ryzhkov, A. V. Insights Into Riming and Aggregation Processes As Revealed By Aircraft, Radar, and Disdrometer Observations For a 27 April 2011 Widespread Precipitation Event. J. Geophys. Res. Atmos. 121, 5846-5863, doi:10.1002/2015JD024537 (2016). [BNL-112320-2016-JA]

Huang, H., Zhang, G., Zhao, K., and Giangrande, S. E. A Hybrid Method to Estimate Specific Differential Phase and Rainfall with Linear Programming and Physics Constraints. IEEE Trans. Geosci. Remote Sensing, accepted (2016). [BNL-112499-2016-JA]

Jensen, M., Petersen, W., Bansemer, A., Bharadwaj, N., Carey, L., Cecil, D., Collis, S., DelGenio, A., Dolan, B., Gerlach, J., Giangrande, S., Heymsfield, A., Heymsfield, G., Kollias, P., Lang, T., Nesbitt, S., Neumann, A., Poellot, M., Rutledge, S., Schwaller, M., Tokay, A., Williams, C., Wolff, D., Xie, S., and Zipser, E. The Midlatitude Continental Convective Clouds Experiment (MC3E). Bull. Amer. Meteor. Soc. 97, 1667-1686, doi:10.1175/BAMS-D-14-00228.1 (2016). [BNL-111943-2016-JA]

Jensen, M. P., Holdridge, D. J., Survo, P., Lehtinen, R., Baxter, S., Toto, T., and Johnson, K. L. Comparison of Vaisala radiosondes RS41 and RS92 at the ARM Southern Great Plains site. Atmos. Meas. Tech. 9, 3115-3129, doi:10.5194/amt-9-3115-2016 (2016). [BNL-112465-2016-JA]

Kalesse, H., de Boer, G., Solomon, A., Oue, M., Ahlgrimm, M., Zhang, D., Shupe, M. D., Luke, E., and Protat, A. Understanding rapid changes in phase partitioning between cloud liquid and ice in stratiform mixed-phase clouds: An Arctic Case Study.  Mon. Wea. Rev., in press, doi:10.1175/MWR-D-16-0155.1 (2016). [BNL-112588-2016-JA]

Kalesse, H., Szyrmer, W., Kneifel, S., Kollias, P., and Luke, E. Fingerprints of a riming event on cloud radar Doppler spectra: observations and modeling. Atmos. Chem. Phys. 16, 2997-3012, doi:10.5194/acp-16-2997-2016 (2016). [BNL-112468-2016-JA]

Kucharik, C. J., Mork, A. C., Meehan, T. D., Serbin, S. P., Singh, A., Townsend, P. A., Stack Whitney, K., and Gratton, C. Evidence for Compensatory Photosynthetic and Yield Response of Soybeans to Aphid Herbivory. Journal of Economic Entomology 109, 1177-1187, doi:10.1093/jee/tow066 (2016). [BNL-112414-2016-JA]

Kleinman, L., Kuang, C., Sedlacek, A., Senum, G., Springston, S., Wang, J., Zhang, Q., Jayne, J., Fast, J., Hubbe, J., Shilling, J., and Zaveri, R. What do correlations tell us about anthropogenic–biogenic interactions and SOA formation in the Sacramento plume during CARES? Atmos. Chem. Phys. 16, 1729-1746, doi:10.5194/acp-16-1729-2016 (2016). [BNL-111950-2016-JA]

Kumjian, M. R., Mishra, S., Giangrande, S. E., Toto, T., Ryzhkov, A. V., and Bansemer, A. Polarimetric Radar and Aircraft Observations of Saggy Bright Bands During MC3E. J. Geophys. Res. Atmos. 121, 3584-3607, doi:10.1002/2015JD024446 (2016). [BNL-111998-2016-JA]

Li, Z., Cheng, X., Gustafson Jr, W. I., and Vogelmann, A. M. Spectral Characteristics of Background Error Covariance and Multiscale Data Assimilation. Internat. J. Numerical Methods in Fluids, accepted, doi:10.1002/fld.4253 (2016). [BNL-112323-2016-JA]

Lin, Y., Wang, Y., Pan, B., Hu, J., Liu, Y., and Zhang, R. Distinct impacts of aerosols on an evolving continental cloud complex during the RACORO field campaign. J. Atmos. Sci. 73, 3681-3700, doi:10.1175/JAS-D-15-0361.1 (2016).  [BNL-112416-2016-JA]

Liu, Y., Brito, J., Dorris, M. R., Rivera-Rios, J. C., Seco, R., Bates, K. H., Artaxo, P., Duvoisin, S., Keutsch, F. N., Kim, S., Goldstein, A. H., Guenther, A. B., Manzi, A. O., Souza, R. A. F., Springston, S. R., Watson, T. B., McKinney, K. A., and Martin, S. T. Isoprene photochemistry over the Amazon rainforest. Proceed. Natl. Acad. Sci. 113, 6125-6130, doi:10.1073/pnas.1524136113 (2016). [BNL-112478-2016-JA]

Liu, G., Liu, Y., and Endo, S. Corrigendum to “Evaluation of Surface Flux Parameterizations with Long-Term ARM Observations”.  Mon. Wea. Rev., accepted (2016). [BNL-113309-2016-JA]

Lu, C., Liu, Y., Zhang, G. J., Wu, X., Endo, S., Cao, L., Li, Y., and Guo, X. Improving Parameterization of Entrainment Rate for Shallow Convection with Aircraft Measurements and Large Eddy Simulation. J. Atmos. Sci. 73, 761-773, doi:10.1175/JAS-D-15-0050.1 (2016).  [BNL-111645-2015-JA]

Madronich, S., Conley, A., Lee-Taylor, J., Kleinman, L., Hodzic, A., and Aumont, B. Non-Linear Partitioning and Organic Volatility Distributions in Urban Aerosols. Faraday Discussions 189, 515-528, doi:10.1039/C5FD00209E (2016). [BNL-111945-2016-JA]

Martin, S. T., Artaxo, P., Machado, L. A. T., Manzi, A. O., Souza, R. A. F., Schumacher, C., Wang, J., Andreae, M. O., Barbosa, H. M. J., Fan, J., Fisch, G., Goldstein, A. H., Guenther, A., Jimenez, J. L., Pöschl, U., Silva Dias, M. A., Smith, J. N., and Wendisch, M. Introduction: Observations and Modeling of the Green Ocean Amazon (GoAmazon2014/5). Atmos. Chem. Phys. 16, 4785-4797, doi:10.5194/acp-16-4785-2016 (2016). [BNL-112483-2016-JA]

Moon, J., Kalb, P. D., Milian, L., and Northrup, P. A. Characterization of a sustainable sulfur polymer concrete using activated fillers. Cement & Concrete Composites 67, 20-29, doi:10.1016/j.cemconcomp.2015.12.002 (2016). [BNL-112696-2016-JA]

Oue, M., Kollias, P., North, K. W., Tatarevic, A., Endo, S., Vogelmann, A. M., and Gustafson, W. I. Estimation of Cloud Fraction Profile in Shallow Convection Using a Scanning Cloud Radar. Geophy. Res. Lettrs 43, 10,998-11,006, doi:10.1002/2016GL070776 (2016). [BNL-112725-2016-JA]

Palo, M., Eller, M., Uin, J., and Tamm, E. Electric wind in a Differential Mobility Analyzer. Boreal Environ. Res. 21, 221–229 (2016). [BNL-111646-2015-JA]

Presser, C., Nazarian, A., Conny, J. M., Chand, D., Sedlacek, A., and Hubbe, J. M. Absorption/Transmission Measurements of PSAP Particle-Laden Filters from the Biomass Burning Observation Project (BBOP) Field Campaign. Aerosol Sci. Tech., accepted (2016). [BNL-113301-2016-JA]

Rogers, A., Medlyn, B. E., Dukes, J. S., Bonan, G., von Caemmerer, S., Dietze, M. C., Kattge, J., Leakey, A. D. B., Mercado, L. M., Niinemets, Ü., Prentice, I. C., Serbin, S. P., Sitch, S., Way, D. A., and Zaehle, S. A Roadmap for Improving the Representation of Photosynthesis in Earth System Models. New Phytologist, accepted (2016). [BNL-113144-2016-JA]

Riihimaki, L. D., Comstock, J. M., Anderson, K. K., Holmes, A., and Luke, E. A path towards uncertainty assignment in an operational cloud-phase algorithm from ARM vertically pointing active sensors. Adv. Stat. Clim. Meteorol. Oceanogr. 2, 49-62, doi:10.5194/ascmo-2-49-2016 (2016). [BNL-112562-2016-JA]

Shiklomanov, A. N., Dietze, M. C., Viskari, T., Townsend, P. A., and Serbin, S. P. Quantifying the influences of spectral resolution on uncertainty in leaf trait estimates through a Bayesian approach to RTM inversion. Remote Sensing of Environment 183, 226-238, doi:10.1016/j.rse.2016.05.023 (2016). [BNL-112627-2016-JA]

Tang, S., Xie, S., Zhang, Y., Zhang, M., Schumacher, C., Upton, H., Jensen, M. P., Johnson, K. L., Wang, M., Ahlgrimm, M., Feng, Z., Minnis, P., and Thieman, M. Large-scale vertical velocity, diabatic heating and drying profiles associated with seasonal and diurnal variations of convective systems observed in the GoAmazon2014/5 experiment. Atmos. Chem. Phys. 16, 14249-14264, doi:10.5194/acp-16-14249-2016 (2016). [BNL-113239-2016-JA]

Wang, X., Heald, C. L., Sedlacek, A. J., de Sá, S. S., Martin, S. T., Alexander, M. L., Watson, T. B., Aiken, A. C., Springston, S. R., and Artaxo, P. Deriving brown carbon from multiwavelength absorption measurements: Method and application to AERONET and Aethalometer observations. Atmos. Chem. Phys. 16, 12733-12752, doi:10.5194/acp-16-12733-2016 (2016). [BNL-112751-2016-JA]

White, A. C., Rogers, A., Rees, M., and Osborne, C. P. How can we make plants grow faster? A source–sink perspective on growth rate. J. Exp. Bot. 67, 31-45, doi:10.1093/jxb/erv447 (2016). [BNL-112417-2016-JA]

Winkler, P. M., McGraw, R. L., Bauer, P. S., Rentenberger, C., and Wagner, P. E. Direct determination of three-phase contact line properties on nearly molecular scale. Nature 6, 26111, doi:10.1038/srep26111 (2016). [BNL-112155-2016-JA]

Wood, R., Jensen, M. P., Wang, J., Bretherton, C. S., Burrows, S. M., Genio, A. D. D., Fridlind, A. M., Ghan, S. J., Ghate, V. P., Kollias, P., Krueger, S. K., McGraw, R. L., Miller, M. A., Painemal, D., Russell, L. M., Yuter, S. E., and Zuidema, P. Planning the next decade of coordinated research to better understand and simulate marine low clouds. Bull. Amer. Meteorol. Soc. 97, 1699-1702, doi:10.1175/BAMS-D-16-0160.1 (2016). [BNL-112319-2016-JA]

Wu, J., Chavana-Bryant, C., Prohaska, N., Serbin, S. P., Guan, K., Albert, L. P., Yang, X., van Leeuwen, W. J. D., Garnello, A. J., Martins, G., Malhi, Y., Gerard, F., Oliviera, R. C., and Saleska, S. R. Convergence in relationships between leaf traits, spectra and age across diverse canopy environments and two contrasting tropical forests. New Phytologist, in press, doi:10.1111/nph.14051 (2016). [BNL-112628-2016-JA]

Xie, X., Wang, H., Liu, X., Li, J., Wang, Z., and Liu, Y. Distinct effects of anthropogenic aerosols on the East Asian summer monsoon between multi-decadal strong and weak monsoon stages. J. Geophys. Res. Atmos. 121, 7026-7040, doi:10.1002/2015JD024228 (2016). [BNL-112324-2016-JA]

Yang, W., Marshak, A., McBride, P. J., Chiu, J. C., Knyazikhin, Y., Schmidt, K. S., Flynn, C., Lewis, E. R., and Eloranta, E. W. Observation of the spectrally invariant properties of clouds in cloudy-to-clear transition zones during the MAGIC field campaign. Atmos. Res. 182, 294-301, doi:10.1016/j.atmosres.2016.08.004 (2016). [BNL-113297-2016-JA]

Yang, X., Tang, J., Mustard, J. F., Wu, J., Zhao, K., Serbin, S., and Lee, J.-E. Seasonal variability of multiple leaf traits captured by leaf spectroscopy at two temperate deciduous forests. Remote Sensing of Environment 179, 1-12, doi:10.1016/j.rse.2016.03.026 (2016). [BNL-112192-2016-JA]

Zhou, S., Collier, S., Xu, J., Mei, F., Wang, J., Lee, Y.-N., Sedlacek, A. J., Springston, S. R., Sun, Y., and Zhang, Q. Influences of upwind emission sources and atmospheric processing on aerosol chemistry and properties at a rural location in the Northeastern U.S. J. Geophys. Res. Atmos. 121, 6049-6065, doi:10.1002/2015JD024568 (2016). [BNL-112733-2016-JA]


Meetings,Proceedings and Abstracts

Xu, J., Yoo, S., Heiser, J., and Kalb, P. Sensor network based solar forecasting using a local vector autoregressive ridge framework. Proceedings of the 31st Annual ACM Symposium on Applied Computing, Pisa, Italy, Apr. 4-8, pp. 2113-2118, Association for Computing Machinery, 2016.  [BNL-112572-2016]



Heiser, J. and Smith, S. Meteorological services annual data report for 2015. Informal Report, BNL-111783-2016-IR, Jan. 2016.

Jensen, M., Bartholomew, M. J., and Giangrande, S. 915-Mhz Wind Profiler for Cloud Forecasting at Brookhaven National Laboratory. Formal Report, BNL-112641-2016, March 2016.

Jensen, M., Wang, J., and Wood, R. Atmospheric System Research Marine Low Clouds Workshop Report, January 27-29, 2016. Prepared for U.S. Department of Energy, Office of Science, Formal Report, BNL-112642-2016, June 2016.

Jensen, M. P., Giangrande, S. E., and Bartholomew, M. J. Radar Wind Profiler for Cloud Forecasting at Brookhaven National Laboratory (BNL) Field Campaign Report. Prepared for U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, Formal Report, BNL-112643-2016, April 2016.

Jensen, M. P. and Toto, T. Interpolated Sounding and Gridded Sounding Value-Added Products. Prepared for U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, Formal Report, BNL-112644-2016, March 2016.

Nasiri, S., Lesmes, D., Petty, R., Schmid, B., Serbin, S., Vogelmann, A., de Boer, G., Dafflon, B., Guenther, A., and Moore, D. Aerial Observation Needs Workshop, May 13-14, 2015. Prepared for U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, Formal Report, BNL-112640-2015, Sept. 2016.

Nasiri, S., Williamson, A., Cappa, C. D., Kotamarthi, R., Sedlacek, A. J., Flynn, C., Lewis, E., McComiskey, A., and Riemer, N. Absorbing Aerosols Workshop, January 20-21, 2016. Prepared for U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, Germantown, Formal Report, BNL-112462-2016, July 2016.

Sullivan, T. Basement Fill Model Evaluation of Maximum Radionuclide Concentrations for Initial Suite of Radionuclides. Zion Station Restoration Project, Informal Report, Revision 1, BNL-107249-2014-IR-R1, May 2016.

Sullivan, T. Evaluation of Maximum Radionuclide Groundwater Concentrations for Basement Fill Model. Zion Station Restoration Project, Informal Report, Revision 2, BNL-107250-2016-IR-R2, May 2016.